Publication Highlights
- Broman KW, Gatti DM, Simecek P, Furlotte NA, Prins P, Sen Ś, Yandell BS, Churchill GA
R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multiparent PopulationsGenetics. 2019 Feb;211(2):495-502. doi: 10.1534/genetics.118.301595. Epub 2018 Dec 27. [ Pubmed ] [full text]
- Keller MP, Rabaglia ME, Schueler KL, Stapleton DS, Gatti DM, Vincent M, Mitok KA, Wang Z, Ishimura T, Simonett SP, Emfinger CH, Das R, Beck T, Kendziorski C, Broman KW, Yandell BS, Churchill GA, Attie AD
Gene loci associated with insulin secretion in islets from non-diabetic mice
J Clin Invest. 2019 Jul 25;130. doi: 10.1172/JCI129143 [ Pubmed ] [full text]
- Keller MP, Simecek P, Schueler KL, Rabaglia ME, Stapleton DS, Broman AT, Gatti DM, Vincent M, Allen S, Bacher R, Kendziorski C, Broman KW, Yandell BS, Churchill GA, Attie AD
Genetic Drivers of Pancreatic Islet FunctionGenetics. 2018 May;209(1):335-356. doi: 10.1534/genetics.118.300864. Epub 2018 Mar 22. [ Pubmed ] [full text]
Data Dryad Link to data
Sequence Read Archive
QTL Viewer
- Raghupathy N, Choi K, Vincent MJ, Beane GL, Sheppard KS, Munger SC, Korstanje R, Pardo-Manual de Villena F, Churchill GA.
Hierarchical analysis of RNA-seq reads improves the accuracy of allele-specific expression.
Bioinformatics. 2018 Jul 1;34(13):2177-2184. doi: 10.1093/bioinformatics/bty078 [ Pubmed ] [full text]
- Srivastava A, Morgan AP, Najarian ML, Sarsani VK, Sigmon JS, Shorter JR, Kashfeen A, McMullan RC, Williams LH, Giusti-Rodríguez P, Ferris MT, Sullivan P, Hock P, Miller DR, Bell TA, McMillan L, Churchill GA, de Villena FP.
Genomes of the Mouse Collaborative Cross
Genetics. 2017 Jun;206(2):537-556. doi: 10.1534/genetics.116.198838. [ Pubmed ] [full text]
- Chick JM, Munger SC, Simecek P, Huttlin EL, Choi K, Gatti DM, Raghupathy N, Svenson KL, Churchill GA, Gygi SP
Defining the consequences of genetic variation on a proteome-wide scale
Nature. 2016 Jun 23;534(7608):500-5. doi: 10.1038/nature18270. Epub 2016 Jun 15 [ Pubmed ] [full text]
[ data ] – Data needs to be moved to new location (recommend doing so as single zip file)
- French JE, Gatti DM, Morgan DL, Kissling GE, Shockley KR, Knudsen GA, Shepard, KG, Price HC, King D, Witt KL, Pedersen LC, Munger SC, Svenson KL, Churchill GA
Diversity Outbred Mice Identify Population Based Exposure Thresholds and Genetic Factors that Influence Benzene-Induced Genotoxicity
Env. Health Persp., 2015;123(3):237-45 PMCID: PMC4348743 [ Full Text ]
